1 Correlations

2 Enrichment score

3 Graph analysis

3.1 Correlation with all markers, corr cut-off=0.9, ES cutoff=0.9

## [1] "Average edge weights (number of methods that agree): 1.66988210075027"
## [1] "Count of edge weights: "
## upper_adj
##    0    1    2    3    4 
## 4017  549  204  119   61

3.2 Correlation with all markers, corr cut-off=0.75, ES cutoff=0.75

## [1] "Average edge weights (number of methods that agree): 1.58532778355879"
## [1] "Count of edge weights: "
## upper_adj
##    0    1    2    3    4 
## 3028 1140  527  167   88

3.3 Correlation with all markers, corr cut-off=0.95, ES cutoff=0.95

## [1] "Average edge weights (number of methods that agree): 1.63287250384025"
## [1] "Count of edge weights: "
## upper_adj
##    0    1    2    3    4 
## 4299  401  130   78   42

3.4 Correlation with union of markers in top 25%, corr cut-off=0.9, ES cutoff=0.9

## [1] "Average edge weights (number of methods that agree): 1.70691547749726"
## [1] "Count of edge weights: "
## upper_adj
##    0    1    2    3    4 
## 4039  521  196  134   60